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  5. Zm00001d028013_T001

Zm00001d028013_T001


Description : pumilio 7


Gene families : OG_01_0008611 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008611_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028013_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028013_T001 No neighbors in network
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_129


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 630 669
IPR001313 Pumilio_RNA-bd_rpt Pfam 455 482
IPR001313 Pumilio_RNA-bd_rpt Pfam 414 446
IPR001313 Pumilio_RNA-bd_rpt Pfam 600 630
IPR001313 Pumilio_RNA-bd_rpt Pfam 564 581
IPR001313 Pumilio_RNA-bd_rpt Pfam 381 408
IPR001313 Pumilio_RNA-bd_rpt Pfam 526 560
IPR001313 Pumilio_RNA-bd_rpt Pfam 638 671
IPR001313 Pumilio_RNA-bd_rpt Pfam 496 521
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 449 485
IPR011989 ARM-like Gene3D 364 694
IPR001313 Pumilio_RNA-bd_rpt SMART 522 557
IPR001313 Pumilio_RNA-bd_rpt SMART 375 409
IPR001313 Pumilio_RNA-bd_rpt SMART 634 669
IPR001313 Pumilio_RNA-bd_rpt SMART 594 629
IPR001313 Pumilio_RNA-bd_rpt SMART 449 485
IPR001313 Pumilio_RNA-bd_rpt SMART 410 445
IPR001313 Pumilio_RNA-bd_rpt SMART 486 521
IPR001313 Pumilio_RNA-bd_rpt SMART 558 593
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 486 521
IPR033712 Pumilio_RNA-bd CDD 379 687
IPR016024 ARM-type_fold SUPERFAMILY 378 692
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 558 593
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 410 446
IPR033133 PUM-HD ProSiteProfiles 345 694
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 558 593
IPR011989 ARM-like Gene3D 364 694
IPR033133 PUM-HD ProSiteProfiles 345 694
IPR016024 ARM-type_fold SUPERFAMILY 378 692
IPR001313 Pumilio_RNA-bd_rpt Pfam 527 559
IPR001313 Pumilio_RNA-bd_rpt Pfam 564 581
IPR001313 Pumilio_RNA-bd_rpt Pfam 497 520
IPR001313 Pumilio_RNA-bd_rpt Pfam 381 399
IPR001313 Pumilio_RNA-bd_rpt Pfam 455 483
IPR001313 Pumilio_RNA-bd_rpt Pfam 414 447
IPR001313 Pumilio_RNA-bd_rpt Pfam 601 630
IPR001313 Pumilio_RNA-bd_rpt Pfam 638 671
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 449 485
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 630 669
IPR001313 Pumilio_RNA-bd_rpt SMART 522 557
IPR001313 Pumilio_RNA-bd_rpt SMART 375 409
IPR001313 Pumilio_RNA-bd_rpt SMART 594 629
IPR001313 Pumilio_RNA-bd_rpt SMART 634 669
IPR001313 Pumilio_RNA-bd_rpt SMART 449 485
IPR001313 Pumilio_RNA-bd_rpt SMART 410 445
IPR001313 Pumilio_RNA-bd_rpt SMART 486 521
IPR001313 Pumilio_RNA-bd_rpt SMART 558 593
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 486 521
IPR033712 Pumilio_RNA-bd CDD 379 687
IPR001313 Pumilio_RNA-bd_rpt ProSiteProfiles 410 446

No CAZYmes available for this sequence

No external refs found!