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  5. Zm00001d028103_T001

Zm00001d028103_T001


Description : Glycosyl hydrolase family 10 protein


Gene families : OG_01_0015269 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015269_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028103_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028103_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_18
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_38


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001000 GH10_dom Pfam 234 491
IPR008979 Galactose-bd-like_sf SUPERFAMILY 53 187
IPR003305 CenC_carb-bd Pfam 55 172
IPR001000 GH10_dom SMART 268 519
IPR001000 GH10_dom ProSiteProfiles 225 519
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 219 527
IPR044846 GH10 PANTHER 13 569
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 219 527
IPR008979 Galactose-bd-like_sf SUPERFAMILY 53 187
IPR001000 GH10_dom Pfam 231 491
IPR001000 GH10_dom ProSiteProfiles 225 519
IPR001000 GH10_dom SMART 268 519
IPR003305 CenC_carb-bd Pfam 55 172
IPR044846 GH10 PANTHER 13 570
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM22 131 581 2e-19 56 172
GH10 303 581 2.7e-58 232 493
No external refs found!