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  5. Zm00001d028227_T007

Zm00001d028227_T007


Description : Glycosyl hydrolases family 31 protein


Gene families : OG_01_0009702 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009702_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028227_T007
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028227_T007
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_242
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_232


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0030246 carbohydrate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013780 Glyco_hydro_b Gene3D 700 772
IPR000322 Glyco_hydro_31_TIM Pfam 353 681
IPR013780 Glyco_hydro_b Gene3D 773 917
IPR011013 Gal_mutarotase_sf_dom SUPERFAMILY 87 339
IPR025887 Glyco_hydro_31_N_dom Pfam 88 301
IPR033403 DUF5110 Pfam 795 844
IPR030458 Glyco_hydro_31_AS ProSitePatterns 505 512
IPR048395 Glyco_hydro_31_C Pfam 689 776
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 340 689
IPR030458 Glyco_hydro_31_AS ProSitePatterns 505 512
IPR000322 Glyco_hydro_31_TIM Pfam 332 776
IPR025887 Glyco_hydro_31_N_dom Pfam 225 301
IPR013780 Glyco_hydro_b Gene3D 700 772
IPR011013 Gal_mutarotase_sf_dom SUPERFAMILY 87 339
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 340 689
IPR013780 Glyco_hydro_b Gene3D 773 917
HMM Family HMM Length Query Length e-Value Query Start Query End
GH31 427 918 2.5e-162 332 776
No external refs found!