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  5. Zm00001d028275_T001

Zm00001d028275_T001


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0014038 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014038_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028275_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028275_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_187


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 223 257
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 262 296
IPR002885 Pentatricopeptide_rpt Pfam 261 309
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 402 436
IPR011990 TPR-like_helical_dom_sf Gene3D 327 467
IPR002885 Pentatricopeptide_rpt NCBIfam 225 255
IPR002885 Pentatricopeptide_rpt NCBIfam 264 297
IPR002885 Pentatricopeptide_rpt NCBIfam 197 224
IPR002885 Pentatricopeptide_rpt Pfam 219 251
IPR011990 TPR-like_helical_dom_sf Gene3D 113 252
IPR011990 TPR-like_helical_dom_sf Gene3D 253 326
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 332 366
IPR002885 Pentatricopeptide_rpt Pfam 335 364
IPR002885 Pentatricopeptide_rpt Pfam 405 434
IPR002885 Pentatricopeptide_rpt Pfam 219 251
IPR002885 Pentatricopeptide_rpt Pfam 258 290
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 262 296
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 223 257
IPR011990 TPR-like_helical_dom_sf Gene3D 327 467
IPR002885 Pentatricopeptide_rpt Pfam 405 434
IPR002885 Pentatricopeptide_rpt Pfam 335 364
IPR011990 TPR-like_helical_dom_sf Gene3D 113 252
IPR011990 TPR-like_helical_dom_sf Gene3D 253 326
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 332 366
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 402 436
IPR002885 Pentatricopeptide_rpt TIGRFAM 225 255
IPR002885 Pentatricopeptide_rpt TIGRFAM 197 224
IPR002885 Pentatricopeptide_rpt TIGRFAM 264 297

No CAZYmes available for this sequence

No external refs found!