Zm00001d028332_T006

Description : coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative

Gene families : OG_01_0000530 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000530_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028332_T006
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028332_T006
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_184

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
CC	GO:0030117	membrane coat	ISM	GOs from InterProScan
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032154	Coatomer_g_Cpla	Pfam	782	896
IPR009028	Coatomer/calthrin_app_sub_C	SUPERFAMILY	784	896
IPR017106	Coatomer_gsu	PIRSF	20	897
IPR012295	TBP_dom_sf	Gene3D	781	897
IPR011989	ARM-like	Gene3D	36	328
IPR013040	Coatomer_gsu_app_Ig-like_dom	Pfam	634	779
IPR013041	Clathrin_app_Ig-like_sf	SUPERFAMILY	628	783
IPR017106	Coatomer_gsu	PANTHER	19	896
IPR037067	Coatomer_gsu_app_sf	Gene3D	625	780
IPR016024	ARM-type_fold	SUPERFAMILY	41	575
IPR002553	Clathrin/coatomer_adapt-like_N	Pfam	41	553
IPR037067	Coatomer_gsu_app_sf	Gene3D	625	780
IPR002553	Clathrin/coatomer_adapt-like_N	Pfam	43	553
IPR017106	Coatomer_gsu	PIRSF	20	897
IPR016024	ARM-type_fold	SUPERFAMILY	41	575
IPR011989	ARM-like	Gene3D	36	328
IPR032154	Coatomer_g_Cpla	Pfam	782	896
IPR013041	Clathrin_app_Ig-like_sf	SUPERFAMILY	628	783
IPR009028	Coatomer/calthrin_app_sub_C	SUPERFAMILY	784	896
IPR012295	TBP_dom_sf	Gene3D	781	897
IPR013040	Coatomer_gsu_app_Ig-like_dom	Pfam	634	779
IPR017106	Coatomer_gsu	PANTHER	10	899

No CAZYmes available for this sequence

External Links

No external refs found!