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  5. Zm00001d028358_T003

Zm00001d028358_T003


Description : anaphase promoting complex 6


Gene families : OG_01_0010012 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010012_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028358_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028358_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_114
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_227


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019734 TPR_repeat Pfam 533 565
IPR019734 TPR_repeat ProSiteProfiles 390 423
IPR019734 TPR_repeat ProSiteProfiles 356 389
IPR019734 TPR_repeat ProSiteProfiles 531 564
IPR001440 TPR_1 Pfam 500 525
IPR019734 TPR_repeat Pfam 171 200
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 287 567
IPR011990 TPR-like_helical_dom_sf Gene3D 45 578
IPR019734 TPR_repeat SMART 390 423
IPR019734 TPR_repeat SMART 169 202
IPR019734 TPR_repeat SMART 497 530
IPR019734 TPR_repeat SMART 531 564
IPR019734 TPR_repeat SMART 356 389
IPR019734 TPR_repeat SMART 288 321
IPR019734 TPR_repeat SMART 424 457
IPR019734 TPR_repeat SMART 458 491
IPR019734 TPR_repeat ProSiteProfiles 497 530
IPR019734 TPR_repeat ProSiteProfiles 531 564
IPR019734 TPR_repeat ProSiteProfiles 497 530
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 287 567
IPR019734 TPR_repeat ProSiteProfiles 356 389
IPR011990 TPR-like_helical_dom_sf Gene3D 45 578
IPR011716 TPR-3 Pfam 465 484
IPR011716 TPR-3 Pfam 536 555
IPR001440 TPR_1 Pfam 500 525
IPR019734 TPR_repeat ProSiteProfiles 390 423
IPR019734 TPR_repeat Pfam 171 200
IPR019734 TPR_repeat SMART 390 423
IPR019734 TPR_repeat SMART 169 202
IPR019734 TPR_repeat SMART 497 530
IPR019734 TPR_repeat SMART 531 564
IPR019734 TPR_repeat SMART 356 389
IPR019734 TPR_repeat SMART 288 321
IPR019734 TPR_repeat SMART 424 457
IPR019734 TPR_repeat SMART 458 491

No CAZYmes available for this sequence

No external refs found!