Zm00001d028398_T003

Description : Glycosyl hydrolase family 10 protein

Gene families : OG_01_0008610 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008610_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028398_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028398_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_16
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_49

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044846	GH10	PANTHER	83	562
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	211	515
IPR031158	GH10_AS	ProSitePatterns	437	447
IPR001000	GH10_dom	SMART	259	510
IPR001000	GH10_dom	Pfam	222	480
IPR008969	CarboxyPept-like_regulatory	SUPERFAMILY	518	566
IPR001000	GH10_dom	ProSiteProfiles	213	509
IPR001000	GH10_dom	PRINTS	290	302
IPR001000	GH10_dom	PRINTS	372	383
IPR001000	GH10_dom	PRINTS	405	417
IPR001000	GH10_dom	PRINTS	334	345
IPR001000	GH10_dom	PRINTS	290	302
IPR001000	GH10_dom	PRINTS	372	383
IPR001000	GH10_dom	PRINTS	405	417
IPR001000	GH10_dom	PRINTS	334	345
IPR008969	CarboxyPept-like_regulatory	SUPERFAMILY	518	566
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	211	515
IPR001000	GH10_dom	Pfam	222	480
IPR001000	GH10_dom	ProSiteProfiles	213	509
IPR001000	GH10_dom	SMART	259	510
IPR044846	GH10	PANTHER	1	566
IPR031158	GH10_AS	ProSitePatterns	437	447

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
CBM22	131	568	6.8e-07	88	160
GH10	303	568	8.6e-69	221	481

External Links

No external refs found!