Zm00001d028438_T002


Description : SEC7-like guanine nucleotide exchange family protein


Gene families : OG_01_0009014 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009014_tree

Sequence : cds (download), rna (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028438_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028438_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_133
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_235


Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity ISM GOs from InterProScan
BP GO:0032012 regulation of ARF protein signal transduction ISM GOs from InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Source Start Stop
IPR015403 Mon2/Sec7/BIG1-like_HDS Pfam 1179 1261
IPR000904 Sec7_dom CDD 639 821
IPR023394 Sec7_C_sf Gene3D 714 832
IPR016024 ARM-type_fold SUPERFAMILY 401 1518
IPR000904 Sec7_dom Pfam 640 821
IPR035999 Sec7_dom_sf SUPERFAMILY 636 827
IPR032691 Mon2/Sec7/BIG1-like_HUS Pfam 368 526
IPR000904 Sec7_dom SMART 636 821
IPR046455 Sec7/BIG1-like_C Pfam 1585 1784
IPR032629 DCB_dom Pfam 31 230
IPR000904 Sec7_dom ProSiteProfiles 632 819
IPR032817 Mon2_C Pfam 1282 1418
IPR032629 DCB_dom Pfam 18 230
IPR015403 Mon2/Sec7/BIG1-like_HDS Pfam 1179 1261
IPR000904 Sec7_dom ProSiteProfiles 632 819
IPR032817 Mon2_C Pfam 1355 1418
IPR016024 ARM-type_fold SUPERFAMILY 401 1518
IPR023394 Sec7_C_sf Gene3D 714 832
IPR035999 Sec7_dom_sf SUPERFAMILY 636 827
IPR000904 Sec7_dom CDD 639 821
IPR000904 Sec7_dom SMART 636 821
IPR000904 Sec7_dom Pfam 640 821
IPR032691 Mon2/Sec7/BIG1-like_HUS Pfam 368 526

No CAZYmes available for this sequence

No external refs found!