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  5. Zm00001d028464_T013

Zm00001d028464_T013


Description : Rho GTPase activation protein (RhoGAP) with PH domain


Gene families : OG_01_0002498 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002498_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028464_T013
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028464_T013
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_241


Type GO Term Name Evidence Source
BP GO:0007165 signal transduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000198 RhoGAP_dom SMART 207 397
IPR001849 PH_domain ProSiteProfiles 52 159
IPR001849 PH_domain Pfam 54 158
IPR000198 RhoGAP_dom ProSiteProfiles 201 400
IPR008936 Rho_GTPase_activation_prot Gene3D 181 402
IPR011993 PH-like_dom_sf Gene3D 42 160
IPR000198 RhoGAP_dom Pfam 212 353
IPR008936 Rho_GTPase_activation_prot SUPERFAMILY 212 404
IPR001849 PH_domain SMART 53 161
IPR025757 MIP1_Leuzipper Pfam 528 609
IPR001849 PH_domain Pfam 53 158
IPR000198 RhoGAP_dom SMART 207 397
IPR001849 PH_domain ProSiteProfiles 52 159
IPR000198 RhoGAP_dom ProSiteProfiles 201 400
IPR008936 Rho_GTPase_activation_prot SUPERFAMILY 212 404
IPR011993 PH-like_dom_sf Gene3D 42 160
IPR001849 PH_domain SMART 53 161
IPR008936 Rho_GTPase_activation_prot Gene3D 181 402
IPR000198 RhoGAP_dom Pfam 212 353
IPR025757 MIP1_Leuzipper Pfam 529 609

No CAZYmes available for this sequence

No external refs found!