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Description : XB3 ortholog 1 in Arabidopsis thaliana
Gene families : OG_01_0010767 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010767_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028616_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028616_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_268 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_138 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002110 | Ankyrin_rpt | PRINTS | 114 | 129 |
| IPR002110 | Ankyrin_rpt | PRINTS | 175 | 189 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 196 | 228 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 159 | 191 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 309 | 383 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 19 | 252 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 79 | 111 |
| IPR001841 | Znf_RING | ProSiteProfiles | 324 | 373 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 113 | 145 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 10 | 146 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 149 | 200 |
| IPR002110 | Ankyrin_rpt | Pfam | 154 | 222 |
| IPR002110 | Ankyrin_rpt | Pfam | 51 | 137 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 46 | 78 |
| IPR002110 | Ankyrin_rpt | SMART | 229 | 258 |
| IPR002110 | Ankyrin_rpt | SMART | 159 | 188 |
| IPR002110 | Ankyrin_rpt | SMART | 46 | 75 |
| IPR002110 | Ankyrin_rpt | SMART | 113 | 143 |
| IPR002110 | Ankyrin_rpt | SMART | 79 | 108 |
| IPR002110 | Ankyrin_rpt | SMART | 196 | 225 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 201 | 253 |
| IPR002110 | Ankyrin_rpt | SMART | 229 | 258 |
| IPR002110 | Ankyrin_rpt | SMART | 159 | 188 |
| IPR002110 | Ankyrin_rpt | SMART | 46 | 75 |
| IPR002110 | Ankyrin_rpt | SMART | 113 | 143 |
| IPR002110 | Ankyrin_rpt | SMART | 79 | 108 |
| IPR002110 | Ankyrin_rpt | SMART | 196 | 225 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 113 | 145 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 196 | 228 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 19 | 252 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 201 | 253 |
| IPR001841 | Znf_RING | ProSiteProfiles | 324 | 373 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 46 | 78 |
| IPR002110 | Ankyrin_rpt | Pfam | 113 | 184 |
| IPR002110 | Ankyrin_rpt | Pfam | 197 | 250 |
| IPR002110 | Ankyrin_rpt | Pfam | 19 | 110 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 10 | 146 |
| IPR002110 | Ankyrin_rpt | PRINTS | 114 | 129 |
| IPR002110 | Ankyrin_rpt | PRINTS | 175 | 189 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 149 | 200 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 309 | 383 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 159 | 191 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 79 | 111 |
No CAZYmes available for this sequence
| No external refs found! |