Zm00001d029049_T001

Description : photosystem II family protein

Gene families : OG_01_0016039 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016039_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d029049_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d029049_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_90
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_97

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010206	photosystem II repair	ISM	GOs from InterProScan
BP	GO:0010207	photosystem II assembly	ISM	GOs from InterProScan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030091	protein repair	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR025585	PSII_Psb27	Hamap	38	166
IPR038450	PSII_Psb27_sf	Gene3D	65	170
IPR025585	PSII_Psb27	Pfam	15	166
IPR006311	TAT_signal	ProSiteProfiles	1	65
IPR025585	PSII_Psb27	PANTHER	30	166
IPR038450	PSII_Psb27_sf	Gene3D	65	170
IPR006311	TAT_signal	ProSiteProfiles	1	65
IPR025585	PSII_Psb27	PANTHER	18	170
IPR025585	PSII_Psb27	Hamap	38	166
IPR025585	PSII_Psb27	Pfam	15	166

No CAZYmes available for this sequence

External Links

No external refs found!