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  5. Zm00001d029537_T001

Zm00001d029537_T001


Description : FAR1-related sequence 3


Gene families : OG_01_0005427 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005427_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d029537_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d029537_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_279
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_40


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
BP GO:0006355 regulation of DNA-templated transcription ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001289 NFYA ProSiteProfiles 195 242
IPR001289 NFYA SMART 194 237
IPR001289 NFYA Pfam 198 232
IPR007527 Znf_SWIM ProSiteProfiles 1 28
IPR001289 NFYA PANTHER 75 230
IPR006564 Znf_PMZ SMART 3 30
IPR007527 Znf_SWIM Pfam 2 25
IPR001289 NFYA ProSiteProfiles 195 242
IPR007527 Znf_SWIM Pfam 2 25
IPR031052 FHY3/FAR1 PANTHER 1 181
IPR001289 NFYA SMART 194 237
IPR007527 Znf_SWIM ProSiteProfiles 1 28
IPR001289 NFYA Pfam 198 233
IPR006564 Znf_PMZ SMART 3 30

No CAZYmes available for this sequence

No external refs found!