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  5. Zm00001d029573_T001

Zm00001d029573_T001


Description : Argonaute family protein


Gene families : OG_01_0015768 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015768_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d029573_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d029573_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_275


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045246 Piwi_ago-like CDD 550 994
IPR003165 Piwi SMART 683 995
IPR003100 PAZ_dom ProSiteProfiles 395 504
IPR003100 PAZ_dom SMART 395 526
IPR003165 Piwi Pfam 684 992
IPR032474 Argonaute_N Pfam 181 326
IPR012337 RNaseH-like_sf SUPERFAMILY 667 996
IPR014811 ArgoL1 SMART 335 387
IPR036397 RNaseH_sf Gene3D 755 1032
IPR003165 Piwi ProSiteProfiles 683 995
IPR003100 PAZ_dom Pfam 399 521
IPR014811 ArgoL1 Pfam 336 385
IPR036085 PAZ_dom_sf SUPERFAMILY 382 539
IPR003165 Piwi SMART 683 995
IPR012337 RNaseH-like_sf SUPERFAMILY 667 996
IPR003165 Piwi ProSiteProfiles 683 995
IPR003100 PAZ_dom SMART 395 526
IPR014811 ArgoL1 Pfam 336 385
IPR014811 ArgoL1 SMART 335 387
IPR003165 Piwi Pfam 684 992
IPR003100 PAZ_dom Pfam 399 521
IPR003100 PAZ_dom ProSiteProfiles 395 504
IPR045246 Piwi_ago-like CDD 550 994
IPR032474 Argonaute_N Pfam 181 326
IPR036397 RNaseH_sf Gene3D 755 1032
IPR036085 PAZ_dom_sf SUPERFAMILY 382 539

No CAZYmes available for this sequence

No external refs found!