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  5. Zm00001d029587_T001

Zm00001d029587_T001


Description : salt tolerance zinc finger


Gene families : OG_01_0015602 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015602_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d029587_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d029587_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_196
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_13


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013087 Znf_C2H2_type Pfam 149 171
IPR013087 Znf_C2H2_type Pfam 92 118
IPR013087 Znf_C2H2_type ProSiteProfiles 93 120
IPR013087 Znf_C2H2_type ProSiteProfiles 149 176
IPR013087 Znf_C2H2_type ProSitePatterns 151 171
IPR013087 Znf_C2H2_type ProSitePatterns 95 115
IPR036236 Znf_C2H2_sf SUPERFAMILY 93 171
IPR044653 AZF1/2/3-like PANTHER 36 211
IPR013087 Znf_C2H2_type SMART 149 171
IPR013087 Znf_C2H2_type SMART 93 115
IPR013087 Znf_C2H2_type ProSitePatterns 151 171
IPR013087 Znf_C2H2_type ProSitePatterns 95 115
IPR013087 Znf_C2H2_type ProSiteProfiles 93 120
IPR013087 Znf_C2H2_type SMART 149 171
IPR013087 Znf_C2H2_type SMART 93 115
IPR044653 AZF1/2/3-like PANTHER 8 237
IPR013087 Znf_C2H2_type ProSiteProfiles 149 176
IPR036236 Znf_C2H2_sf SUPERFAMILY 93 171

No CAZYmes available for this sequence

No external refs found!