Zm00001d029829_T001


Description : U-box domain-containing protein kinase family protein


Gene families : OG_01_0020332 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020332_tree

Sequence : cds (download), rna (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d029829_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d029829_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_227
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_40


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0004842 ubiquitin-protein transferase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Source Start Stop
IPR000719 Prot_kinase_dom SMART 328 607
IPR003613 Ubox_domain SMART 542 596
IPR000719 Prot_kinase_dom Pfam 333 537
IPR003613 Ubox_domain Pfam 542 601
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 334 355
IPR003613 Ubox_domain ProSiteProfiles 542 603
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 446 458
IPR000719 Prot_kinase_dom ProSiteProfiles 328 607
IPR011009 Kinase-like_dom_sf SUPERFAMILY 311 544
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 446 458
IPR000719 Prot_kinase_dom ProSiteProfiles 328 607
IPR003613 Ubox_domain SMART 542 596
IPR003613 Ubox_domain ProSiteProfiles 542 603
IPR000719 Prot_kinase_dom Pfam 333 536
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 334 355
IPR003613 Ubox_domain Pfam 542 601
IPR011009 Kinase-like_dom_sf SUPERFAMILY 311 544
IPR000719 Prot_kinase_dom SMART 328 607

No CAZYmes available for this sequence

No external refs found!