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  5. Zm00001d029916_T005

Zm00001d029916_T005


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0008761 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008761_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d029916_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d029916_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_45
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_36


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006396 RNA processing ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008111 RNA-bd_8 PANTHER 33 96
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 14 86
IPR035979 RBD_domain_sf SUPERFAMILY 29 96
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 14 86
IPR008111 RNA-bd_8 PANTHER 16 96
IPR035979 RBD_domain_sf SUPERFAMILY 29 96

No CAZYmes available for this sequence

No external refs found!