Zm00001d030040_T001

Description : nonsense-mediated mRNA decay NMD3 family protein

Gene families : OG_01_0017646 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017646_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d030040_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d030040_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_103
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_227

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043022	ribosome binding	None	Extended
MF	GO:0043023	ribosomal large subunit binding	ISM	GOs from InterProScan
MF	GO:0044877	protein-containing complex binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR048898	NMD3_OB	Pfam	325	415
IPR007064	Nmd3_N	Pfam	26	258
IPR039768	Nmd3	PANTHER	14	503
IPR048899	NMD_SH3	Pfam	261	307
IPR007064	Nmd3_N	Pfam	26	258
IPR039768	Nmd3	PANTHER	18	505

No CAZYmes available for this sequence

External Links

No external refs found!