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  5. Zm00001d030149_T001

Zm00001d030149_T001


Description : CLP protease P4


Gene families : OG_01_0014883 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014883_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d030149_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d030149_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_261
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51


Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity ISM GOs from InterProScan
MF GO:0004252 serine-type endopeptidase activity ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR023562 ClpP/TepA Pfam 103 277
IPR001907 ClpP CDD 105 275
IPR001907 ClpP Hamap 83 279
IPR029045 ClpP/crotonase-like_dom_sf SUPERFAMILY 104 280
IPR033135 ClpP_His_AS ProSitePatterns 198 211
IPR023562 ClpP/TepA PANTHER 54 285
IPR001907 ClpP PRINTS 254 273
IPR001907 ClpP PRINTS 145 165
IPR001907 ClpP PRINTS 176 193
IPR001907 ClpP PRINTS 105 120
IPR001907 ClpP PRINTS 197 216
IPR023562 ClpP/TepA Pfam 103 277
IPR029045 ClpP/crotonase-like_dom_sf SUPERFAMILY 104 280
IPR033135 ClpP_His_AS ProSitePatterns 198 211
IPR023562 ClpP/TepA PANTHER 84 315
IPR001907 ClpP CDD 105 275
IPR001907 ClpP Hamap 83 279
IPR001907 ClpP PRINTS 254 273
IPR001907 ClpP PRINTS 145 165
IPR001907 ClpP PRINTS 176 193
IPR001907 ClpP PRINTS 105 120
IPR001907 ClpP PRINTS 197 216

No CAZYmes available for this sequence

No external refs found!