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  5. Zm00001d030312_T004

Zm00001d030312_T004


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0024259 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0024259_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d030312_T004
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d030312_T004
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_31


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012340 NA-bd_OB-fold Gene3D 493 618
IPR000504 RRM_dom ProSiteProfiles 27 73
IPR025476 Helitron_helicase-like Pfam 410 506
IPR012340 NA-bd_OB-fold SUPERFAMILY 505 614
IPR000504 RRM_dom Pfam 29 71
IPR035979 RBD_domain_sf SUPERFAMILY 14 73
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 2 75
IPR035979 RBD_domain_sf SUPERFAMILY 14 73
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 2 75
IPR000504 RRM_dom Pfam 29 71
IPR025476 Helitron_helicase-like Pfam 409 506
IPR012340 NA-bd_OB-fold SUPERFAMILY 505 614
IPR000504 RRM_dom ProSiteProfiles 27 73

No CAZYmes available for this sequence

No external refs found!