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Description : signal responsive 1
Gene families : OG_01_0003223 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003223_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d030518_T005 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d030518_T005 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_157 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_105 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | ISM | GOs from InterProScan |
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 685 | 812 |
| IPR002110 | Ankyrin_rpt | Pfam | 724 | 778 |
| IPR002110 | Ankyrin_rpt | SMART | 752 | 781 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 915 | 934 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 939 | 958 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 640 | 814 |
| IPR027417 | P-loop_NTPase | SUPERFAMILY | 911 | 964 |
| IPR005559 | CG-1_dom | SMART | 20 | 138 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 914 | 943 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 913 | 935 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 936 | 958 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 752 | 784 |
| IPR002909 | IPT_dom | Pfam | 518 | 591 |
| IPR014756 | Ig_E-set | SUPERFAMILY | 518 | 604 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 719 | 751 |
| IPR013783 | Ig-like_fold | Gene3D | 511 | 607 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 937 | 961 |
| IPR005559 | CG-1_dom | Pfam | 23 | 136 |
| IPR005559 | CG-1_dom | ProSiteProfiles | 17 | 143 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 719 | 751 |
| IPR002909 | IPT_dom | Pfam | 518 | 593 |
| IPR005559 | CG-1_dom | Pfam | 23 | 136 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 914 | 943 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 752 | 784 |
| IPR027417 | P-loop_NTPase | SUPERFAMILY | 911 | 964 |
| IPR002110 | Ankyrin_rpt | SMART | 752 | 781 |
| IPR005559 | CG-1_dom | SMART | 20 | 138 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 913 | 935 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 936 | 958 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 685 | 812 |
| IPR005559 | CG-1_dom | ProSiteProfiles | 17 | 143 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 937 | 961 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 939 | 958 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 915 | 934 |
| IPR013783 | Ig-like_fold | Gene3D | 511 | 607 |
| IPR014756 | Ig_E-set | SUPERFAMILY | 518 | 604 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 640 | 814 |
No CAZYmes available for this sequence
| No external refs found! |