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  5. Zm00001d030638_T001

Zm00001d030638_T001


Description : Photosystem II reaction center PsbP family protein


Gene families : OG_01_0013505 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013505_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d030638_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d030638_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_261
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
CC GO:0009523 photosystem II ISM GOs from InterProScan
CC GO:0009654 photosystem II oxygen evolving complex ISM GOs from InterProScan
BP GO:0015979 photosynthesis ISM GOs from InterProScan
CC GO:0019898 extrinsic component of membrane ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016123 Mog1/PsbP_a/b/a-sand SUPERFAMILY 178 352
IPR002683 PsbP_C Pfam 177 289
IPR002683 PsbP_C Pfam 176 352
IPR016123 Mog1/PsbP_a/b/a-sand SUPERFAMILY 178 352

No CAZYmes available for this sequence

No external refs found!