Zm00001d030732_T001

Description : plant U-box 13

Gene families : OG_01_0008035 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008035_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d030732_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d030732_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_275
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_116

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000225	Armadillo	Pfam	378	417
IPR000225	Armadillo	Pfam	420	458
IPR000225	Armadillo	Pfam	462	499
IPR045210	RING-Ubox_PUB	CDD	254	306
IPR003613	Ubox_domain	Pfam	253	323
IPR000225	Armadillo	ProSiteProfiles	389	431
IPR003613	Ubox_domain	SMART	256	319
IPR000225	Armadillo	SMART	378	418
IPR000225	Armadillo	SMART	460	500
IPR000225	Armadillo	SMART	419	459
IPR000225	Armadillo	SMART	542	582
IPR000225	Armadillo	SMART	583	623
IPR000225	Armadillo	SMART	501	541
IPR016024	ARM-type_fold	SUPERFAMILY	348	640
IPR013083	Znf_RING/FYVE/PHD	Gene3D	252	326
IPR011989	ARM-like	Gene3D	550	632
IPR003613	Ubox_domain	ProSiteProfiles	252	326
IPR011989	ARM-like	Gene3D	337	461
IPR011989	ARM-like	Gene3D	462	549
IPR003613	Ubox_domain	SMART	256	319
IPR000225	Armadillo	ProSiteProfiles	389	431
IPR011989	ARM-like	Gene3D	337	461
IPR003613	Ubox_domain	Pfam	253	323
IPR011989	ARM-like	Gene3D	462	549
IPR000225	Armadillo	SMART	378	418
IPR000225	Armadillo	SMART	460	500
IPR000225	Armadillo	SMART	419	459
IPR000225	Armadillo	SMART	542	582
IPR000225	Armadillo	SMART	583	623
IPR000225	Armadillo	SMART	501	541
IPR011989	ARM-like	Gene3D	550	632
IPR016024	ARM-type_fold	SUPERFAMILY	348	640
IPR000225	Armadillo	Pfam	420	458
IPR000225	Armadillo	Pfam	379	417
IPR000225	Armadillo	Pfam	462	499
IPR003613	Ubox_domain	ProSiteProfiles	252	326
IPR013083	Znf_RING/FYVE/PHD	Gene3D	252	326
IPR045210	RING-Ubox_PUB	CDD	257	299

No CAZYmes available for this sequence

External Links

No external refs found!