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  5. Zm00001d031416_T001

Zm00001d031416_T001


Description : C2H2-type zinc finger family protein


Gene families : OG_01_0001108 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001108_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d031416_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d031416_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_253
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_91


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
BP GO:0010468 regulation of gene expression ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013087 Znf_C2H2_type ProSiteProfiles 242 269
IPR043584 WIP1/2/3/4/5/6 PANTHER 64 404
IPR036236 Znf_C2H2_sf SUPERFAMILY 310 346
IPR013087 Znf_C2H2_type SMART 352 375
IPR013087 Znf_C2H2_type SMART 326 346
IPR013087 Znf_C2H2_type SMART 242 264
IPR013087 Znf_C2H2_type ProSiteProfiles 326 346
IPR013087 Znf_C2H2_type ProSitePatterns 244 264
IPR036236 Znf_C2H2_sf SUPERFAMILY 238 264
IPR043584 WIP1/2/3/4/5/6 PANTHER 1 422
IPR013087 Znf_C2H2_type ProSiteProfiles 242 269
IPR036236 Znf_C2H2_sf SUPERFAMILY 310 346
IPR013087 Znf_C2H2_type ProSiteProfiles 326 346
IPR013087 Znf_C2H2_type SMART 352 375
IPR013087 Znf_C2H2_type SMART 326 346
IPR013087 Znf_C2H2_type SMART 242 264
IPR013087 Znf_C2H2_type ProSitePatterns 244 264
IPR036236 Znf_C2H2_sf SUPERFAMILY 238 264

No CAZYmes available for this sequence

No external refs found!