1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d031785_T001

Zm00001d031785_T001


Description : S-locus lectin protein kinase family protein


Gene families : OG_01_0009811 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009811_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d031785_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d031785_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_62


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0004674 protein serine/threonine kinase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
BP GO:0048544 recognition of pollen ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 628 640
IPR000858 S_locus_glycoprot_dom Pfam 222 330
IPR000719 Prot_kinase_dom SMART 508 794
IPR000719 Prot_kinase_dom Pfam 511 788
IPR011009 Kinase-like_dom_sf SUPERFAMILY 496 803
IPR003609 Pan_app SMART 358 436
IPR001480 Bulb-type_lectin_dom Pfam 71 189
IPR003609 Pan_app Pfam 358 416
IPR001480 Bulb-type_lectin_dom SMART 29 163
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 23 159
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 57 227
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 514 537
IPR003609 Pan_app ProSiteProfiles 352 437
IPR036426 Bulb-type_lectin_dom_sf Gene3D 18 161
IPR001480 Bulb-type_lectin_dom CDD 31 163
IPR000719 Prot_kinase_dom ProSiteProfiles 508 794
IPR024171 SRK-like_kinase PIRSF 1 812
IPR001480 Bulb-type_lectin_dom Pfam 71 189
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 57 227
IPR000719 Prot_kinase_dom Pfam 511 788
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 23 159
IPR003609 Pan_app ProSiteProfiles 352 437
IPR003609 Pan_app Pfam 358 416
IPR001480 Bulb-type_lectin_dom SMART 29 163
IPR000719 Prot_kinase_dom ProSiteProfiles 508 794
IPR011009 Kinase-like_dom_sf SUPERFAMILY 496 803
IPR000719 Prot_kinase_dom SMART 508 794
IPR024171 SRK-like_kinase PIRSF 1 812
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 628 640
IPR003609 Pan_app SMART 358 436
IPR000858 S_locus_glycoprot_dom Pfam 222 330
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 514 537
IPR036426 Bulb-type_lectin_dom_sf Gene3D 18 161
IPR001480 Bulb-type_lectin_dom CDD 31 163

No CAZYmes available for this sequence

No external refs found!