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  5. Zm00001d031904_T001

Zm00001d031904_T001


Description : Barwin-like endoglucanases superfamily protein


Gene families : OG_01_0044428 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0044428_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d031904_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d031904_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_87


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0009664 plant-type cell wall organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR009009 RlpA-like_DPBB Pfam 91 177
IPR007117 Expansin_CBD ProSiteProfiles 197 277
IPR007112 Expansin/allergen_DPBB_dom SMART 90 177
IPR036749 Expansin_CBD_sf SUPERFAMILY 184 276
IPR007117 Expansin_CBD Pfam 188 266
IPR036749 Expansin_CBD_sf Gene3D 187 281
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 73 187
IPR002963 Expansin PRINTS 162 175
IPR002963 Expansin PRINTS 234 255
IPR002963 Expansin PRINTS 85 99
IPR002963 Expansin PRINTS 186 198
IPR002963 Expansin PRINTS 126 136
IPR002963 Expansin PRINTS 263 279
IPR002963 Expansin PRINTS 145 162
IPR002963 Expansin PRINTS 112 123
IPR002963 Expansin PRINTS 198 219
IPR036908 RlpA-like_sf SUPERFAMILY 54 205
IPR007118 Expan_Lol_pI PRINTS 72 90
IPR007118 Expan_Lol_pI PRINTS 54 69
IPR007118 Expan_Lol_pI PRINTS 170 186
IPR007118 Expan_Lol_pI PRINTS 263 277
IPR007118 Expan_Lol_pI PRINTS 225 239
IPR007118 Expan_Lol_pI PRINTS 94 112
IPR002963 Expansin PANTHER 20 278
IPR036908 RlpA-like_sf Gene3D 41 183
IPR007112 Expansin/allergen_DPBB_dom SMART 90 177
IPR009009 RlpA-like_DPBB Pfam 90 177
IPR002963 Expansin PANTHER 17 281
IPR036749 Expansin_CBD_sf SUPERFAMILY 184 276
IPR036908 RlpA-like_sf Gene3D 41 183
IPR036908 RlpA-like_sf SUPERFAMILY 54 205
IPR007117 Expansin_CBD ProSiteProfiles 197 277
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 73 187
IPR002963 Expansin PRINTS 162 175
IPR002963 Expansin PRINTS 234 255
IPR002963 Expansin PRINTS 85 99
IPR002963 Expansin PRINTS 186 198
IPR002963 Expansin PRINTS 126 136
IPR002963 Expansin PRINTS 263 279
IPR002963 Expansin PRINTS 145 162
IPR002963 Expansin PRINTS 112 123
IPR002963 Expansin PRINTS 198 219
IPR007117 Expansin_CBD Pfam 188 266
IPR036749 Expansin_CBD_sf Gene3D 187 281
IPR007118 Expan_Lol_pI PRINTS 72 90
IPR007118 Expan_Lol_pI PRINTS 54 69
IPR007118 Expan_Lol_pI PRINTS 170 186
IPR007118 Expan_Lol_pI PRINTS 263 277
IPR007118 Expan_Lol_pI PRINTS 225 239
IPR007118 Expan_Lol_pI PRINTS 94 112

No CAZYmes available for this sequence

No external refs found!