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  5. Zm00001d031906_T001

Zm00001d031906_T001


Description : Barwin-like endoglucanases superfamily protein


Gene families : OG_01_0044428 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0044428_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d031906_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d031906_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_72


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0009664 plant-type cell wall organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007117 Expansin_CBD Pfam 176 254
IPR036749 Expansin_CBD_sf Gene3D 175 269
IPR036749 Expansin_CBD_sf SUPERFAMILY 172 264
IPR009009 RlpA-like_DPBB Pfam 86 165
IPR007117 Expansin_CBD ProSiteProfiles 185 265
IPR007112 Expansin/allergen_DPBB_dom SMART 85 165
IPR036908 RlpA-like_sf SUPERFAMILY 49 193
IPR002963 Expansin PRINTS 107 118
IPR002963 Expansin PRINTS 133 150
IPR002963 Expansin PRINTS 150 163
IPR002963 Expansin PRINTS 186 207
IPR002963 Expansin PRINTS 222 243
IPR002963 Expansin PRINTS 80 94
IPR002963 Expansin PRINTS 121 131
IPR002963 Expansin PRINTS 174 186
IPR002963 Expansin PRINTS 251 267
IPR007118 Expan_Lol_pI PRINTS 89 107
IPR007118 Expan_Lol_pI PRINTS 251 265
IPR007118 Expan_Lol_pI PRINTS 49 64
IPR007118 Expan_Lol_pI PRINTS 158 174
IPR007118 Expan_Lol_pI PRINTS 67 85
IPR007118 Expan_Lol_pI PRINTS 213 227
IPR036908 RlpA-like_sf Gene3D 36 170
IPR002963 Expansin PANTHER 15 266
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 68 175
IPR007118 Expan_Lol_pI PRINTS 89 107
IPR007118 Expan_Lol_pI PRINTS 251 265
IPR007118 Expan_Lol_pI PRINTS 49 64
IPR007118 Expan_Lol_pI PRINTS 158 174
IPR007118 Expan_Lol_pI PRINTS 67 85
IPR007118 Expan_Lol_pI PRINTS 213 227
IPR036908 RlpA-like_sf SUPERFAMILY 49 193
IPR002963 Expansin PANTHER 12 269
IPR036749 Expansin_CBD_sf Gene3D 175 269
IPR036749 Expansin_CBD_sf SUPERFAMILY 172 264
IPR002963 Expansin PRINTS 107 118
IPR002963 Expansin PRINTS 133 150
IPR002963 Expansin PRINTS 150 163
IPR002963 Expansin PRINTS 186 207
IPR002963 Expansin PRINTS 222 243
IPR002963 Expansin PRINTS 80 94
IPR002963 Expansin PRINTS 121 131
IPR002963 Expansin PRINTS 174 186
IPR002963 Expansin PRINTS 251 267
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 68 175
IPR007112 Expansin/allergen_DPBB_dom SMART 85 165
IPR009009 RlpA-like_DPBB Pfam 85 165
IPR007117 Expansin_CBD Pfam 176 254
IPR007117 Expansin_CBD ProSiteProfiles 185 265
IPR036908 RlpA-like_sf Gene3D 36 170

No CAZYmes available for this sequence

No external refs found!