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  5. Zm00001d031938_T001

Zm00001d031938_T001


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0008931 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008931_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d031938_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d031938_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_157
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_184


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 36 252
IPR019734 TPR_repeat ProSiteProfiles 177 210
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 206 424
IPR006597 Sel1-like SMART 286 317
IPR006597 Sel1-like SMART 177 208
IPR006597 Sel1-like SMART 388 418
IPR006597 Sel1-like SMART 320 351
IPR006597 Sel1-like SMART 211 242
IPR001440 TPR_1 Pfam 286 318
IPR001440 TPR_1 Pfam 320 351
IPR001440 TPR_1 Pfam 211 244
IPR001440 TPR_1 Pfam 388 420
IPR001440 TPR_1 Pfam 177 203
IPR019734 TPR_repeat ProSiteProfiles 211 244
IPR029489 OGT/SEC/SPY_C Pfam 644 822
IPR029489 OGT/SEC/SPY_C Pfam 461 624
IPR019734 TPR_repeat ProSiteProfiles 388 421
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 346 786
IPR019734 TPR_repeat ProSiteProfiles 68 101
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 31 260
IPR019734 TPR_repeat SMART 286 319
IPR019734 TPR_repeat SMART 252 285
IPR019734 TPR_repeat SMART 211 244
IPR019734 TPR_repeat SMART 143 176
IPR019734 TPR_repeat SMART 177 210
IPR019734 TPR_repeat SMART 388 421
IPR019734 TPR_repeat SMART 34 67
IPR019734 TPR_repeat SMART 354 387
IPR019734 TPR_repeat SMART 320 353
IPR019734 TPR_repeat SMART 102 135
IPR019734 TPR_repeat SMART 68 101
IPR019734 TPR_repeat ProSiteProfiles 286 319
IPR019734 TPR_repeat ProSiteProfiles 354 387
IPR019734 TPR_repeat ProSiteProfiles 320 353
IPR011990 TPR-like_helical_dom_sf Gene3D 253 467
IPR019734 TPR_repeat ProSiteProfiles 102 135
IPR019734 TPR_repeat ProSiteProfiles 320 353
IPR019734 TPR_repeat ProSiteProfiles 68 101
IPR019734 TPR_repeat ProSiteProfiles 177 210
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 206 424
IPR006597 Sel1-like SMART 286 317
IPR006597 Sel1-like SMART 177 208
IPR006597 Sel1-like SMART 388 418
IPR006597 Sel1-like SMART 320 351
IPR006597 Sel1-like SMART 211 242
IPR019734 TPR_repeat SMART 286 319
IPR019734 TPR_repeat SMART 252 285
IPR019734 TPR_repeat SMART 211 244
IPR019734 TPR_repeat SMART 143 176
IPR019734 TPR_repeat SMART 177 210
IPR019734 TPR_repeat SMART 388 421
IPR019734 TPR_repeat SMART 34 67
IPR019734 TPR_repeat SMART 354 387
IPR019734 TPR_repeat SMART 320 353
IPR019734 TPR_repeat SMART 102 135
IPR019734 TPR_repeat SMART 68 101
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 31 260
IPR019734 TPR_repeat ProSiteProfiles 211 244
IPR019734 TPR_repeat ProSiteProfiles 102 135
IPR001440 TPR_1 Pfam 388 420
IPR001440 TPR_1 Pfam 286 318
IPR001440 TPR_1 Pfam 211 244
IPR001440 TPR_1 Pfam 320 351
IPR001440 TPR_1 Pfam 177 203
IPR011990 TPR-like_helical_dom_sf Gene3D 253 467
IPR011990 TPR-like_helical_dom_sf Gene3D 36 252
IPR029489 OGT/SEC/SPY_C Pfam 644 822
IPR029489 OGT/SEC/SPY_C Pfam 461 624
IPR019734 TPR_repeat ProSiteProfiles 388 421
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 346 786
IPR019734 TPR_repeat ProSiteProfiles 286 319
IPR019734 TPR_repeat ProSiteProfiles 354 387
HMM Family HMM Length Query Length e-Value Query Start Query End
GT41 705 912 2.2e-130 348 837
No external refs found!