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Description : vesicle-associated membrane protein 727
Gene families : OG_01_0014457 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014457_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d031942_T003 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d031942_T003 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_249 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_205 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0016192 | vesicle-mediated transport | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR042855 | V_SNARE_CC | ProSiteProfiles | 152 | 212 |
| IPR010908 | Longin_dom | SMART | 33 | 122 |
| IPR010908 | Longin_dom | ProSiteProfiles | 8 | 136 |
| IPR001388 | Synaptobrevin-like | ProSitePatterns | 170 | 189 |
| IPR042855 | V_SNARE_CC | Pfam | 151 | 236 |
| IPR010908 | Longin_dom | Pfam | 34 | 103 |
| IPR010908 | Longin_dom | CDD | 9 | 143 |
| IPR011012 | Longin-like_dom_sf | SUPERFAMILY | 8 | 100 |
| IPR001388 | Synaptobrevin-like | PRINTS | 213 | 232 |
| IPR001388 | Synaptobrevin-like | PRINTS | 157 | 176 |
| IPR001388 | Synaptobrevin-like | PRINTS | 177 | 196 |
| IPR001388 | Synaptobrevin-like | ProSitePatterns | 170 | 189 |
| IPR001388 | Synaptobrevin-like | PRINTS | 213 | 232 |
| IPR001388 | Synaptobrevin-like | PRINTS | 157 | 176 |
| IPR001388 | Synaptobrevin-like | PRINTS | 177 | 196 |
| IPR010908 | Longin_dom | Pfam | 34 | 103 |
| IPR042855 | V_SNARE_CC | Pfam | 151 | 236 |
| IPR010908 | Longin_dom | SMART | 33 | 122 |
| IPR010908 | Longin_dom | CDD | 9 | 143 |
| IPR011012 | Longin-like_dom_sf | SUPERFAMILY | 8 | 100 |
| IPR042855 | V_SNARE_CC | ProSiteProfiles | 152 | 212 |
| IPR010908 | Longin_dom | ProSiteProfiles | 8 | 136 |
No CAZYmes available for this sequence
| No external refs found! |