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  5. Zm00001d031969_T001

Zm00001d031969_T001


Description : 31-kDa RNA binding protein


Gene families : OG_01_0003430 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003430_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d031969_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d031969_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_147
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_212


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 198 269
IPR048289 RRM2_NsCP33-like CDD 208 269
IPR000504 RRM_dom SMART 206 280
IPR000504 RRM_dom SMART 112 185
IPR000504 RRM_dom ProSiteProfiles 111 189
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 58 193
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 194 281
IPR000504 RRM_dom ProSiteProfiles 205 269
IPR000504 RRM_dom Pfam 113 182
IPR000504 RRM_dom Pfam 208 269
IPR035979 RBD_domain_sf SUPERFAMILY 105 201
IPR000504 RRM_dom SMART 206 280
IPR000504 RRM_dom SMART 112 185
IPR035979 RBD_domain_sf SUPERFAMILY 105 201
IPR000504 RRM_dom Pfam 208 269
IPR000504 RRM_dom Pfam 113 182
IPR000504 RRM_dom ProSiteProfiles 205 269
IPR035979 RBD_domain_sf SUPERFAMILY 198 269
IPR000504 RRM_dom ProSiteProfiles 111 189
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 58 193
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 194 281

No CAZYmes available for this sequence

No external refs found!