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  5. Zm00001d032279_T005

Zm00001d032279_T005


Description : ATP-binding cassette A2


Gene families : OG_01_0009813 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009813_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d032279_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d032279_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_295
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_246


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
MF GO:0140359 ABC-type transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003439 ABC_transporter-like_ATP-bd Pfam 555 700
IPR003593 AAA+_ATPase SMART 563 747
IPR026082 ABCA PANTHER 11 866
IPR017871 ABC_transporter-like_CS ProSitePatterns 672 686
IPR027417 P-loop_NTPase Gene3D 510 779
IPR013525 ABC2_TM Pfam 222 446
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 524 770
IPR027417 P-loop_NTPase SUPERFAMILY 550 752
IPR026082 ABCA PANTHER 7 944
IPR027417 P-loop_NTPase SUPERFAMILY 550 752
IPR017871 ABC_transporter-like_CS ProSitePatterns 672 686
IPR003439 ABC_transporter-like_ATP-bd Pfam 556 699
IPR027417 P-loop_NTPase Gene3D 510 779
IPR003593 AAA+_ATPase SMART 563 747
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 524 770

No CAZYmes available for this sequence

No external refs found!