Zm00001d032304_T003

Description : zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein

Gene families : OG_01_0012451 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012451_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d032304_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d032304_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_311
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_259

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013083	Znf_RING/FYVE/PHD	Gene3D	348	437
IPR001841	Znf_RING	ProSiteProfiles	369	414
IPR001841	Znf_RING	SMART	369	413
IPR001841	Znf_RING	Pfam	368	414
IPR036420	BRCT_dom_sf	Gene3D	4	89
IPR001357	BRCT_dom	SMART	4	79
IPR036420	BRCT_dom_sf	SUPERFAMILY	6	88
IPR001357	BRCT_dom	Pfam	9	71
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	466	506
IPR001357	BRCT_dom	ProSiteProfiles	1	89
IPR017907	Znf_RING_CS	ProSitePatterns	385	394
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	459	507
IPR001357	BRCT_dom	Pfam	9	71
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	466	506
IPR001841	Znf_RING	Pfam	368	414
IPR017907	Znf_RING_CS	ProSitePatterns	385	394
IPR036420	BRCT_dom_sf	SUPERFAMILY	6	88
IPR001841	Znf_RING	SMART	369	413
IPR001357	BRCT_dom	SMART	4	79
IPR001841	Znf_RING	ProSiteProfiles	369	414
IPR013083	Znf_RING/FYVE/PHD	Gene3D	348	437
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	459	507
IPR036420	BRCT_dom_sf	Gene3D	4	89
IPR001357	BRCT_dom	ProSiteProfiles	1	89

No CAZYmes available for this sequence

External Links

No external refs found!