Zm00001d032656_T001

Description : Peptidoglycan-binding LysM domain-containing protein

Gene families : OG_01_0007344 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007344_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d032656_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d032656_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_150
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_20

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR018392	LysM_dom	ProSiteProfiles	67	111
IPR045030	LYSM1-4	PANTHER	41	315
IPR036779	LysM_dom_sf	SUPERFAMILY	67	112
IPR036779	LysM_dom_sf	Gene3D	53	125
IPR018392	LysM_dom	SMART	68	112
IPR018392	LysM_dom	CDD	69	111
IPR018392	LysM_dom	Pfam	69	112
IPR036779	LysM_dom_sf	SUPERFAMILY	67	112
IPR018392	LysM_dom	ProSiteProfiles	67	111
IPR018392	LysM_dom	SMART	68	112
IPR018392	LysM_dom	CDD	69	111
IPR045030	LYSM1-4	PANTHER	1	359
IPR018392	LysM_dom	Pfam	69	112
IPR036779	LysM_dom_sf	Gene3D	53	125

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
CBM50	40	360	1.3e-05	69	112

External Links

No external refs found!