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  5. Zm00001d032718_T001

Zm00001d032718_T001


Description : polyubiquitin 10


Gene families : OG_01_0011898 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011898_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d032718_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d032718_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_293
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_130


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 161 236
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 8 79
IPR019956 Ubiquitin_dom PRINTS 19 39
IPR019956 Ubiquitin_dom PRINTS 61 82
IPR019956 Ubiquitin_dom PRINTS 40 60
IPR000626 Ubiquitin-like_dom Pfam 240 308
IPR000626 Ubiquitin-like_dom Pfam 14 79
IPR000626 Ubiquitin-like_dom Pfam 94 156
IPR000626 Ubiquitin-like_dom ProSiteProfiles 160 233
IPR000626 Ubiquitin-like_dom ProSiteProfiles 11 80
IPR000626 Ubiquitin-like_dom SMART 11 80
IPR000626 Ubiquitin-like_dom SMART 237 308
IPR000626 Ubiquitin-like_dom SMART 160 236
IPR000626 Ubiquitin-like_dom SMART 83 155
IPR000626 Ubiquitin-like_dom ProSiteProfiles 83 155
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 235 308
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 83 158
IPR000626 Ubiquitin-like_dom ProSiteProfiles 237 308
IPR000626 Ubiquitin-like_dom ProSiteProfiles 83 155
IPR000626 Ubiquitin-like_dom ProSiteProfiles 237 308
IPR000626 Ubiquitin-like_dom ProSiteProfiles 160 233
IPR000626 Ubiquitin-like_dom ProSiteProfiles 11 80
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 8 79
IPR019956 Ubiquitin_dom PRINTS 19 39
IPR019956 Ubiquitin_dom PRINTS 61 82
IPR019956 Ubiquitin_dom PRINTS 40 60
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 83 158
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 161 236
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 235 308
IPR000626 Ubiquitin-like_dom SMART 237 308
IPR000626 Ubiquitin-like_dom SMART 11 80
IPR000626 Ubiquitin-like_dom SMART 160 236
IPR000626 Ubiquitin-like_dom SMART 83 155
IPR000626 Ubiquitin-like_dom Pfam 15 79
IPR000626 Ubiquitin-like_dom Pfam 240 308
IPR000626 Ubiquitin-like_dom Pfam 94 156

No CAZYmes available for this sequence

No external refs found!