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  5. Zm00001d032884_T001

Zm00001d032884_T001


Description : expansin 11


Gene families : OG_01_0000144 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000144_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d032884_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d032884_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_23
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_53


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0009664 plant-type cell wall organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002963 Expansin PANTHER 8 247
IPR009009 RlpA-like_DPBB Pfam 61 147
IPR036908 RlpA-like_sf Gene3D 10 153
IPR007117 Expansin_CBD ProSiteProfiles 167 246
IPR036749 Expansin_CBD_sf Gene3D 158 251
IPR036749 Expansin_CBD_sf SUPERFAMILY 154 245
IPR007117 Expansin_CBD Pfam 158 235
IPR007112 Expansin/allergen_DPBB_dom SMART 60 147
IPR007118 Expan_Lol_pI PRINTS 64 82
IPR007118 Expan_Lol_pI PRINTS 42 60
IPR007118 Expan_Lol_pI PRINTS 24 39
IPR007118 Expan_Lol_pI PRINTS 140 156
IPR007118 Expan_Lol_pI PRINTS 232 246
IPR007118 Expan_Lol_pI PRINTS 194 208
IPR002963 Expansin PRINTS 232 248
IPR002963 Expansin PRINTS 203 224
IPR002963 Expansin PRINTS 168 189
IPR002963 Expansin PRINTS 98 108
IPR002963 Expansin PRINTS 156 168
IPR002963 Expansin PRINTS 115 132
IPR002963 Expansin PRINTS 132 145
IPR002963 Expansin PRINTS 55 69
IPR036908 RlpA-like_sf SUPERFAMILY 16 175
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 43 157
IPR007118 Expan_Lol_pI PRINTS 64 82
IPR007118 Expan_Lol_pI PRINTS 42 60
IPR007118 Expan_Lol_pI PRINTS 24 39
IPR007118 Expan_Lol_pI PRINTS 140 156
IPR007118 Expan_Lol_pI PRINTS 232 246
IPR007118 Expan_Lol_pI PRINTS 194 208
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 43 157
IPR009009 RlpA-like_DPBB Pfam 61 147
IPR007117 Expansin_CBD Pfam 158 235
IPR007112 Expansin/allergen_DPBB_dom SMART 60 147
IPR036749 Expansin_CBD_sf SUPERFAMILY 154 245
IPR036908 RlpA-like_sf SUPERFAMILY 16 175
IPR036908 RlpA-like_sf Gene3D 10 153
IPR007117 Expansin_CBD ProSiteProfiles 167 246
IPR036749 Expansin_CBD_sf Gene3D 158 251
IPR002963 Expansin PRINTS 232 248
IPR002963 Expansin PRINTS 203 224
IPR002963 Expansin PRINTS 168 189
IPR002963 Expansin PRINTS 98 108
IPR002963 Expansin PRINTS 156 168
IPR002963 Expansin PRINTS 115 132
IPR002963 Expansin PRINTS 132 145
IPR002963 Expansin PRINTS 55 69
IPR002963 Expansin PANTHER 2 251

No CAZYmes available for this sequence

No external refs found!