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  5. Zm00001d033055_T001

Zm00001d033055_T001


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG_01_0001522 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001522_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d033055_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d033055_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_13
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_91


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR042099 ANL_N_sf Gene3D 18 446
IPR025110 AMP-bd_C Pfam 460 535
IPR020845 AMP-binding_CS ProSitePatterns 200 211
IPR045851 AMP-bd_C_sf Gene3D 447 548
IPR000873 AMP-dep_Synth/Lig_com Pfam 40 410
IPR025110 AMP-bd_C Pfam 460 535
IPR020845 AMP-binding_CS ProSitePatterns 200 211
IPR000873 AMP-dep_Synth/Lig_com Pfam 40 451
IPR045851 AMP-bd_C_sf Gene3D 447 548
IPR042099 ANL_N_sf Gene3D 18 446

No CAZYmes available for this sequence

No external refs found!