Zm00001d033204_T002

Description : methyl-CPG-binding domain 11

Gene families : OG_01_0000321 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000321_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d033204_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d033204_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_250

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	Pfam	150	192
IPR039622	MBD10/11	PANTHER	145	473
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	122	194
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	150	219
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	122	194
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	150	219
IPR039622	MBD10/11	PANTHER	318	473
IPR001739	Methyl_CpG_DNA-bd	Pfam	147	190
IPR039622	MBD10/11	PANTHER	101	323

No CAZYmes available for this sequence

External Links

No external refs found!