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  5. Zm00001d033240_T002

Zm00001d033240_T002


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_01_0000934 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000934_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d033240_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d033240_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_4
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_237


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027356 NPH3_dom ProSiteProfiles 211 491
IPR027356 NPH3_dom Pfam 211 467
IPR000210 BTB/POZ_dom SMART 28 124
IPR011333 SKP1/BTB/POZ_sf Gene3D 15 131
IPR043454 NPH3/RPT2-like PANTHER 25 587
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 16 113
IPR000210 BTB/POZ_dom ProSiteProfiles 28 96
IPR000210 BTB/POZ_dom Pfam 26 113
IPR027356 NPH3_dom ProSiteProfiles 211 491
IPR000210 BTB/POZ_dom SMART 28 124
IPR000210 BTB/POZ_dom Pfam 27 116
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 16 113
IPR027356 NPH3_dom Pfam 211 467
IPR011333 SKP1/BTB/POZ_sf Gene3D 15 131
IPR000210 BTB/POZ_dom ProSiteProfiles 28 96
IPR043454 NPH3/RPT2-like PANTHER 3 613

No CAZYmes available for this sequence

No external refs found!