Zm00001d033361_T001

Description : hAT transposon superfamily

Gene families : OG_01_0000885 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000885_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d033361_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d033361_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_22
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_14

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008906	HATC_C_dom	Pfam	508	578
IPR003656	Znf_BED	ProSiteProfiles	37	95
IPR012337	RNaseH-like_sf	SUPERFAMILY	265	581
IPR012337	RNaseH-like_sf	SUPERFAMILY	265	581
IPR003656	Znf_BED	ProSiteProfiles	37	95
IPR008906	HATC_C_dom	Pfam	504	578

No CAZYmes available for this sequence

External Links

No external refs found!