1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d033593_T001

Zm00001d033593_T001


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0003784 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003784_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d033593_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d033593_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_679
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_217


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt Pfam 78 106
IPR002885 Pentatricopeptide_rpt Pfam 47 77
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 76 110
IPR011990 TPR-like_helical_dom_sf Gene3D 4 75
IPR046848 E_motif Pfam 206 264
IPR011990 TPR-like_helical_dom_sf Gene3D 76 276
IPR002885 Pentatricopeptide_rpt NCBIfam 78 105
IPR002885 Pentatricopeptide_rpt TIGRFAM 78 105
IPR011990 TPR-like_helical_dom_sf Gene3D 4 75
IPR002885 Pentatricopeptide_rpt Pfam 47 77
IPR002885 Pentatricopeptide_rpt Pfam 78 106
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 76 110
IPR011990 TPR-like_helical_dom_sf Gene3D 76 276

No CAZYmes available for this sequence

No external refs found!