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  5. Zm00001d033862_T001

Zm00001d033862_T001


Description : 1-amino-cyclopropane-1-carboxylate synthase 8


Gene families : OG_01_0002820 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002820_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d033862_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d033862_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_91


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
BP GO:0009058 biosynthetic process ISM GOs from InterProScan
MF GO:0030170 pyridoxal phosphate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015422 PyrdxlP-dep_Trfase_small Gene3D 40 440
IPR004839 Aminotransferase_I/II Pfam 52 441
IPR004838 NHTrfase_class1_PyrdxlP-BS ProSitePatterns 286 299
IPR015421 PyrdxlP-dep_Trfase_major Gene3D 74 335
IPR015424 PyrdxlP-dep_Trfase SUPERFAMILY 21 445
IPR004838 NHTrfase_class1_PyrdxlP-BS ProSitePatterns 286 299
IPR015424 PyrdxlP-dep_Trfase SUPERFAMILY 21 445
IPR015422 PyrdxlP-dep_Trfase_small Gene3D 40 440
IPR004839 Aminotransferase_I/II Pfam 52 441
IPR015421 PyrdxlP-dep_Trfase_major Gene3D 74 335

No CAZYmes available for this sequence

No external refs found!