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  5. Zm00001d033977_T001

Zm00001d033977_T001


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0010829 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010829_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d033977_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d033977_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_507


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR046848 E_motif Pfam 540 597
IPR011990 TPR-like_helical_dom_sf Gene3D 253 378
IPR045215 PPR_prot_At1g15510 PANTHER 308 598
IPR002885 Pentatricopeptide_rpt Pfam 160 180
IPR002885 Pentatricopeptide_rpt Pfam 291 318
IPR002885 Pentatricopeptide_rpt Pfam 262 284
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 421 455
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 289 319
IPR011990 TPR-like_helical_dom_sf Gene3D 393 597
IPR011990 TPR-like_helical_dom_sf Gene3D 99 252
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 186 220
IPR002885 Pentatricopeptide_rpt Pfam 420 468
IPR002885 Pentatricopeptide_rpt Pfam 320 365
IPR002885 Pentatricopeptide_rpt Pfam 186 232
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 320 354
IPR002885 Pentatricopeptide_rpt NCBIfam 291 319
IPR002885 Pentatricopeptide_rpt NCBIfam 322 354
IPR002885 Pentatricopeptide_rpt NCBIfam 188 221
IPR002885 Pentatricopeptide_rpt NCBIfam 425 456
IPR002885 Pentatricopeptide_rpt Pfam 291 318
IPR002885 Pentatricopeptide_rpt Pfam 322 350
IPR002885 Pentatricopeptide_rpt Pfam 262 284
IPR002885 Pentatricopeptide_rpt Pfam 160 180
IPR002885 Pentatricopeptide_rpt Pfam 186 232
IPR002885 Pentatricopeptide_rpt Pfam 420 467
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 186 220
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 320 354
IPR002885 Pentatricopeptide_rpt TIGRFAM 322 354
IPR002885 Pentatricopeptide_rpt TIGRFAM 188 221
IPR002885 Pentatricopeptide_rpt TIGRFAM 425 456
IPR002885 Pentatricopeptide_rpt TIGRFAM 291 319
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 421 455
IPR011990 TPR-like_helical_dom_sf Gene3D 253 378
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 289 319
IPR011990 TPR-like_helical_dom_sf Gene3D 393 597
IPR011990 TPR-like_helical_dom_sf Gene3D 99 252

No CAZYmes available for this sequence

No external refs found!