1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d033980_T001

Zm00001d033980_T001


Description : calmodulin 5


Gene families : OG_01_0016327 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016327_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d033980_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d033980_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_229


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011992 EF-hand-dom_pair SUPERFAMILY 2 150
IPR002048 EF_hand_dom CDD 2 45
IPR002048 EF_hand_dom Pfam 86 149
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 132 144
IPR002048 EF_hand_dom ProSiteProfiles 15 50
IPR002048 EF_hand_dom Pfam 6 44
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 28 40
IPR002048 EF_hand_dom ProSiteProfiles 119 154
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 96 108
IPR002048 EF_hand_dom CDD 87 149
IPR002048 EF_hand_dom ProSiteProfiles 83 118
IPR002048 EF_hand_dom SMART 123 151
IPR002048 EF_hand_dom SMART 19 47
IPR002048 EF_hand_dom SMART 87 115
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 96 108
IPR002048 EF_hand_dom CDD 2 45
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 28 40
IPR011992 EF-hand-dom_pair SUPERFAMILY 2 150
IPR002048 EF_hand_dom Pfam 6 44
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 132 144
IPR002048 EF_hand_dom ProSiteProfiles 83 118
IPR002048 EF_hand_dom CDD 87 149
IPR002048 EF_hand_dom Pfam 86 149
IPR002048 EF_hand_dom ProSiteProfiles 15 50
IPR002048 EF_hand_dom ProSiteProfiles 119 154
IPR002048 EF_hand_dom SMART 123 151
IPR002048 EF_hand_dom SMART 19 47
IPR002048 EF_hand_dom SMART 87 115

No CAZYmes available for this sequence

No external refs found!