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  5. Zm00001d033984_T002

Zm00001d033984_T002


Description : Beige/BEACH domain ;WD domain, G-beta repeat protein


Gene families : OG_01_0005908 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005908_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d033984_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d033984_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_141


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 3233 3426
IPR036372 BEACH_dom_sf SUPERFAMILY 2936 3224
IPR001680 WD40_rpt ProSiteProfiles 3517 3558
IPR011989 ARM-like Gene3D 467 887
IPR013320 ConA-like_dom_sf SUPERFAMILY 1059 1251
IPR000409 BEACH_dom ProSiteProfiles 2932 3224
IPR023362 PH-BEACH_dom Pfam 2857 2906
IPR000409 BEACH_dom CDD 2945 3224
IPR000409 BEACH_dom Pfam 2945 3224
IPR001680 WD40_rpt ProSiteProfiles 3354 3389
IPR023362 PH-BEACH_dom CDD 2744 2909
IPR011993 PH-like_dom_sf Gene3D 2745 2906
IPR001680 WD40_rpt Pfam 3514 3548
IPR001680 WD40_rpt Pfam 3310 3337
IPR001680 WD40_rpt Pfam 3354 3386
IPR019775 WD40_repeat_CS ProSitePatterns 3373 3387
IPR036372 BEACH_dom_sf Gene3D 2934 3224
IPR023362 PH-BEACH_dom ProSiteProfiles 2741 2907
IPR001680 WD40_rpt SMART 3510 3549
IPR001680 WD40_rpt SMART 3347 3386
IPR001680 WD40_rpt SMART 3442 3476
IPR001680 WD40_rpt SMART 3294 3338
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 3427 3557
IPR016024 ARM-type_fold SUPERFAMILY 563 994
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 3277 3553
IPR000409 BEACH_dom SMART 2944 3224
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 3427 3557
IPR001680 WD40_rpt Pfam 3308 3337
IPR001680 WD40_rpt Pfam 3354 3386
IPR019775 WD40_repeat_CS ProSitePatterns 3373 3387
IPR016024 ARM-type_fold SUPERFAMILY 563 994
IPR023362 PH-BEACH_dom CDD 2744 2909
IPR036372 BEACH_dom_sf Gene3D 2934 3224
IPR000409 BEACH_dom Pfam 2945 3224
IPR036372 BEACH_dom_sf SUPERFAMILY 2936 3224
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 3277 3553
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 3233 3426
IPR013320 ConA-like_dom_sf SUPERFAMILY 1059 1251
IPR001680 WD40_rpt SMART 3510 3549
IPR001680 WD40_rpt SMART 3347 3386
IPR001680 WD40_rpt SMART 3442 3476
IPR001680 WD40_rpt SMART 3294 3338
IPR000409 BEACH_dom ProSiteProfiles 2932 3224
IPR000409 BEACH_dom SMART 2944 3224
IPR000409 BEACH_dom CDD 2945 3224
IPR001680 WD40_rpt ProSiteProfiles 3354 3389
IPR011993 PH-like_dom_sf Gene3D 2745 2906
IPR023362 PH-BEACH_dom Pfam 2852 2906
IPR011989 ARM-like Gene3D 467 887
IPR001680 WD40_rpt ProSiteProfiles 3517 3558
IPR023362 PH-BEACH_dom ProSiteProfiles 2741 2907

No CAZYmes available for this sequence

No external refs found!