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  5. Sevir.2G112200.1

Sevir.2G112200.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0005995 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005995_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G112200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G112200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_213
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_2


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 188 337
IPR019734 TPR_repeat SMART 350 383
IPR019734 TPR_repeat SMART 223 256
IPR019734 TPR_repeat SMART 257 290
IPR019734 TPR_repeat SMART 384 417
IPR011990 TPR-like_helical_dom_sf Gene3D 353 427
IPR019734 TPR_repeat ProSiteProfiles 350 383
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 200 421

No CAZYmes available for this sequence

No external refs found!