Zm00001d034412_T001

Description : HIS HF

Gene families : OG_01_0005119 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005119_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d034412_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d034412_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_301
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_244

Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005047	signal recognition particle binding	ISM	GOs from InterProScan
MF	GO:0005048	signal sequence binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006547	histidine metabolic process	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006613	cotranslational protein targeting to membrane	None	Extended
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008312	7S RNA binding	ISM	GOs from InterProScan
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016763	pentosyltransferase activity	ISM	GOs from InterProScan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030942	endoplasmic reticulum signal peptide binding	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
MF	GO:0042277	peptide binding	None	Extended
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0045047	protein targeting to ER	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
CC	GO:0048500	signal recognition particle	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070972	protein localization to endoplasmic reticulum	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR010139	Imidazole-glycPsynth_HisH	PANTHER	82	266
IPR026258	SRP68	Pfam	32	92
IPR017926	GATASE	Pfam	114	265
IPR010139	Imidazole-glycPsynth_HisH	NCBIfam	102	266
IPR010139	Imidazole-glycPsynth_HisH	CDD	99	266
IPR038253	SRP68_N_sf	Gene3D	29	91
IPR029062	Class_I_gatase-like	SUPERFAMILY	98	265
IPR029062	Class_I_gatase-like	Gene3D	93	266
IPR026258	SRP68	Pfam	32	92
IPR029062	Class_I_gatase-like	Gene3D	93	266
IPR010139	Imidazole-glycPsynth_HisH	CDD	99	266
IPR017926	GATASE	Pfam	114	265
IPR010139	Imidazole-glycPsynth_HisH	TIGRFAM	102	266
IPR029062	Class_I_gatase-like	SUPERFAMILY	98	265
IPR010139	Imidazole-glycPsynth_HisH	PANTHER	64	266
IPR038253	SRP68_N_sf	Gene3D	29	91

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d034412_T001

Expression Profile

Co-expression Networks

Functional Annotation