Zm00001d034515_T002

Description : Homeodomain-like transcriptional regulator

Gene families : OG_01_0002740 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002740_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d034515_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d034515_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_134
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_224

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001356	Homeobox_dom	Pfam	23	72
IPR044977	RLT1-3	PANTHER	172	1172
IPR009057	Homeobox-like_sf	SUPERFAMILY	23	75
IPR028941	WHIM2_dom	Pfam	812	882
IPR028942	WHIM1_dom	Pfam	692	724
IPR001356	Homeobox_dom	CDD	21	63
IPR018501	DDT_dom	ProSiteProfiles	413	472
IPR001356	Homeobox_dom	ProSiteProfiles	13	73
IPR018501	DDT_dom	Pfam	416	467
IPR001356	Homeobox_dom	SMART	14	77
IPR018501	DDT_dom	ProSiteProfiles	413	472
IPR001356	Homeobox_dom	ProSiteProfiles	13	73
IPR018501	DDT_dom	Pfam	416	467
IPR001356	Homeobox_dom	CDD	21	63
IPR009057	Homeobox-like_sf	SUPERFAMILY	23	75
IPR028942	WHIM1_dom	Pfam	693	724
IPR001356	Homeobox_dom	Pfam	23	72
IPR028941	WHIM2_dom	Pfam	812	882
IPR001356	Homeobox_dom	SMART	14	77
IPR044977	RLT1-3	PANTHER	1	1178

No CAZYmes available for this sequence

External Links

No external refs found!