Zm00001d034565_T002

Description : N2,N2-dimethylguanosine tRNA methyltransferase

Gene families : OG_01_0012201 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012201_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d034565_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d034565_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_114
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_107

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0004809	obsolete tRNA (guanine-N2-)-methyltransferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR029063	SAM-dependent_MTases_sf	SUPERFAMILY	12	523
IPR029063	SAM-dependent_MTases_sf	Gene3D	179	463
IPR029063	SAM-dependent_MTases_sf	Gene3D	12	88
IPR002905	Trm1	NCBIfam	15	523
IPR042296	tRNA_met_Trm1_C	Gene3D	465	523
IPR002905	Trm1	ProSiteProfiles	12	521
IPR002905	Trm1	Pfam	15	522
IPR002905	Trm1	PANTHER	6	591
IPR002905	Trm1	ProSiteProfiles	12	521
IPR042296	tRNA_met_Trm1_C	Gene3D	465	523
IPR002905	Trm1	TIGRFAM	15	523
IPR002905	Trm1	Pfam	14	522
IPR002905	Trm1	PANTHER	7	127
IPR002905	Trm1	PANTHER	181	616
IPR029063	SAM-dependent_MTases_sf	SUPERFAMILY	12	523

No CAZYmes available for this sequence

External Links

No external refs found!