Zm00001d034597_T003

Description : HIT zinc finger ;PAPA-1-like conserved region

Gene families : OG_01_0010449 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010449_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d034597_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d034597_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_157
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_275

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0031011	Ino80 complex	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
CC	GO:0070603	SWI/SNF superfamily-type complex	None	Extended
BP	GO:0071824	protein-DNA complex organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0097346	INO80-type complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007529	Znf_HIT	Pfam	482	513
IPR029523	INO80B/Ies2	PANTHER	1	517
IPR006880	INO80B_C	SMART	384	466
IPR006880	INO80B_C	Pfam	384	466
IPR029523	INO80B/Ies2	PANTHER	1	518
IPR006880	INO80B_C	Pfam	384	466
IPR006880	INO80B_C	SMART	384	466
IPR007529	Znf_HIT	Pfam	482	513

No CAZYmes available for this sequence

External Links

No external refs found!