Zm00001d034810_T006

Description : Class I peptide chain release factor

Gene families : OG_01_0012093 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012093_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d034810_T006
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d034810_T006
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_219
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_201

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003747	translation release factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006415	translational termination	ISM	GOs from InterProScan
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036372	BEACH_dom_sf	Gene3D	331	457
IPR045853	Pep_chain_release_fac_I_sf	SUPERFAMILY	92	158
IPR000409	BEACH_dom	ProSiteProfiles	231	470
IPR036372	BEACH_dom_sf	SUPERFAMILY	360	440
IPR000352	Pep_chain_release_fac_I	Pfam	93	157
IPR000409	BEACH_dom	SMART	280	470
IPR000409	BEACH_dom	Pfam	358	437
IPR000352	Pep_chain_release_fac_I	Pfam	93	157
IPR000409	BEACH_dom	Pfam	358	436
IPR000409	BEACH_dom	ProSiteProfiles	231	470
IPR000409	BEACH_dom	SMART	280	470
IPR007482	Tyr_Pase-like_PTPLA	Pfam	257	291
IPR036372	BEACH_dom_sf	SUPERFAMILY	360	440
IPR036372	BEACH_dom_sf	Gene3D	331	457
IPR045853	Pep_chain_release_fac_I_sf	SUPERFAMILY	92	158

No CAZYmes available for this sequence

External Links

No external refs found!