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  5. Zm00001d034883_T003

Zm00001d034883_T003


Description : nucleotide binding;protein binding


Gene families : OG_01_0001100 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001100_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d034883_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d034883_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_114
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_107


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 62 104
IPR001680 WD40_rpt SMART 98 137
IPR001680 WD40_rpt SMART 278 317
IPR001680 WD40_rpt SMART 192 232
IPR001680 WD40_rpt SMART 55 95
IPR001680 WD40_rpt SMART 319 360
IPR001680 WD40_rpt SMART 235 274
IPR019775 WD40_repeat_CS ProSitePatterns 82 96
IPR001680 WD40_rpt ProSiteProfiles 328 369
IPR007287 Sof1 Pfam 361 447
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 152 433
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 54 360
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 41 143
IPR020472 G-protein_beta_WD-40_rep PRINTS 82 96
IPR020472 G-protein_beta_WD-40_rep PRINTS 347 361
IPR020472 G-protein_beta_WD-40_rep PRINTS 124 138
IPR001680 WD40_rpt ProSiteProfiles 285 317
IPR001680 WD40_rpt Pfam 60 95
IPR001680 WD40_rpt Pfam 334 359
IPR001680 WD40_rpt Pfam 285 317
IPR001680 WD40_rpt Pfam 100 136
IPR001680 WD40_rpt Pfam 196 232
IPR001680 WD40_rpt ProSiteProfiles 105 146
IPR001680 WD40_rpt Pfam 62 95
IPR001680 WD40_rpt Pfam 331 360
IPR001680 WD40_rpt Pfam 101 137
IPR001680 WD40_rpt Pfam 285 317
IPR001680 WD40_rpt ProSiteProfiles 105 146
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 54 360
IPR001680 WD40_rpt ProSiteProfiles 285 317
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 152 433
IPR020472 G-protein_beta_WD-40_rep PRINTS 82 96
IPR020472 G-protein_beta_WD-40_rep PRINTS 347 361
IPR020472 G-protein_beta_WD-40_rep PRINTS 124 138
IPR019775 WD40_repeat_CS ProSitePatterns 82 96
IPR007287 Sof1 Pfam 361 447
IPR001680 WD40_rpt SMART 278 317
IPR001680 WD40_rpt SMART 98 137
IPR001680 WD40_rpt SMART 192 232
IPR001680 WD40_rpt SMART 55 95
IPR001680 WD40_rpt SMART 319 360
IPR001680 WD40_rpt SMART 235 274
IPR001680 WD40_rpt ProSiteProfiles 62 104
IPR001680 WD40_rpt ProSiteProfiles 328 369
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 41 143

No CAZYmes available for this sequence

No external refs found!